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Estimating Daily Actual Evotranspiration at Field scale using Remote Sensing

  • Writer: Arpit Shah
    Arpit Shah
  • Apr 29, 2023
  • 14 min read

Updated: Apr 23

  1. INTRODUCTION


When Jessey Dickson, a bright Ghanaian pursuing his MSc. in Environmental Quality Sciences on scholarship from the Hebrew University of Jerusalem, reached out to me late-January this year (2023) on LinkedIn with a particular request - Can you prepare a tutorial for deriving Evotranspiration using SNAP software? - my initial feeling of surprise was soon overcome by a sense of satisfaction.


Jessey at a remote Agri-research site in Israel
Figure 1: Jessey at a remote Agri-research site in Israel

For starters, I had never even heard of the term Evotranspiration before, let alone know how to derive it. But to realize that my work posted on this professional site was increasingly being observed and appreciated by student researchers around the world signalled to me that while I grapple with the private sector in India trying to create a niche in Mapping Solutions for Operations Improvement, moments like this would bring joy and encouragement along the way.


My lazy and superficial responses did not deter Jessey who was determined to find a way to complete his assignment on estimating Evotranspiration using Remote Sensing shared by his professor. He shared hyperlinks to web tutorials on this topic and upon reviewing it, I decided to support him in his endeavour.


While Jessey had already chosen the farmlands around Gadot, Israel as his study area, I decided to replicate the Evotranspiration workflow over an agri-zone within the state of Punjab in my country India. After hours of whatsapp exchanges, video meetings and workings on Sentinels Application Platform (SNAP) software, we were finally able to fulfill our objectives - mine being this post and the elaborate, step-by-step video tutorial on estimating Field-scale Daily (Actual) Evotranspiration using Remote Sensing within it.

HYPERLINKS TO SECTIONS


  1. EVOTRANSPIRATION AND FACTORS AFFECTING IT


Evotranspiration (ET) represents the total loss of water (and energy) from the Earth's surface into the atmosphere and is a combination of two terms - Evaporation, which is the direct movement of water from soil, canopies, capillary fringe of the groundwater table and water bodies on land into the atmosphere, and Transpiration, which is the indirect transfer of water from the soil surface into the atmosphere via the leaves and roots of vegetation. This release of water vapour into the atmosphere forms a crucial component (largest after precipitation) of our planet's Hydrologic Cycle.

Hydrologic Cycle diagram. The left, on-land section pertains to Evotranspiration. Source: LangeLeslie, CC BY-SA 4.0 <https://creativecommons.org/licenses/by-sa/4.0>, via Wikimedia Commons
Figure 2: Hydrologic Cycle diagram. The left, on-land section pertains to Evotranspiration. Source: LangeLeslie, CC BY-SA 4.0 <https://creativecommons.org/licenses/by-sa/4.0>, via Wikimedia Commons
Think about what could be the possible benefits of computing Water (and Energy) transfer into the atmosphere. I'll address it later in this post.

Here are some of the factors which contribute towards Evotranspiration-

Factors affecting Evotranspiration summarized under five categories
Figure 3: Factors affecting Evotranspiration summarized under five categories
  1. TYPES OF EVOTRANSPIRATION


Evotranspiration is typically expressed in millimeters/unit of time (in water vapour released terms) or in watts/unit of distance (in energy released terms) and come in three variants-


  1. Actual Evotranspiration (ETa) involves figuring how much water vapour (and energy) was actually released from the soil and vegetation into the atmosphere over a period of time in a given study area. The exact values of parameters such as precipitation, soil moisture, wind speed and solar radiation are taken into consideration during the computation of ETa, and thus, this is the most authentic representation of the phenomena. However, as you would imagine, to derive ETa is costly, time-consuming, and requires significant technical expertise.


  1. Potential Evotranspiration (ETp) involves measuring the phenomena considering water supply as unlimited. Hence, ETp is a way of saying what is the maximum water (and energy) that the soil and vegetation can transmit into the atmosphere over a period of time in a given study area through the influence of meteorological variables such as air temperature, solar radiation and wind speed. Measuring ETp is preferred in Drought Assessment studies and other Land-Air interaction studies, or when the derivation of ETa is not feasible - for example, if the study area is very large or if it is beyond budgetary means.


  1. Reference Evotranspiration (ETref) is ETp measured on a reference surface, typically well-watered and short, even grass. ETref is utilized when there is a need to standardize the measurement of the atmospheric demand of water vapor instead of measuring it on different types of surfaces. Weather Stations measure ETref extensively and even house the reference surface within its premises.

ETref (Reference Evotranspiration) readings at Weather Stations in USA. Source: https://www.weather.gov/ict/Evapotranspiration
Figure 4: ETref (Reference Evotranspiration) readings at Weather Stations in USA. Source: https://www.weather.gov/ict/Evapotranspiration






Evotranspiration studies can be classified on the basis of geographic scale as well - Local, Field, Watershed, Regional and Continental scale.


At Local scale, Lysimeter equipment is used to measure ETa and for larger Field-scale studies, Drones can be used to obtain Evotranspiration-related data.

Above ground (left) and underground (right) view of Weighing Lysimeter equipment. Source: ICTInternational.com
Figure 5: Above ground (left) and underground (right) view of Weighing Lysimeter equipment. Source: ICTInternational.com

As the geographic extent extends to Regional scale and beyond, Satellite Imagery-based Remote Sensing is preferred to estimate Evotranspiration (be it ETa or ETp). Besides being cost-effective, Remote Sensing offers a synoptic view of the study area at regular time intervals.

Energy Balance Model used in estimating ET. Source: Rohit Pradhan's Deck, SAC Ahmedabad
Figure 6: Energy Balance Model used in estimating ET. Source: Rohit Pradhan's Deck, SAC Ahmedabad

For my study, I have utilized Remote Sensing too, obtaining Satellite Imagery from European Space Agency's' Sentinel-2 (Multispectral sensor) and Sentinel-3 (Thermal sensor) satellites and Field scale Meteorological data from Copernicus Climate Data Store to estimate Daily Actual Evotranspiration (ETa) at an agri-zone within the state of Punjab in India.

  1. UTILITY OF EVOTRANSPIRATION


By now I believe you can gauge the importance of monitoring Evotranspiration - the necessity to keep a tab on the dynamic relationship between water inflow and water outflow. One way in which the social and environmental impact of any global-scale phenomena can be assessed is by seeing if, and by how much, it contributes towards the 17 Sustainable Development Goals (SDGs) for peace and prosperity for people and the planet prescribed by the United Nations in 2015.


As established by Sentinels for Evotranspiration (SEN-ET), Evotranspiration monitoring is directly relevant to at least two of the SDGs: Zero hunger (Goal 2) and Clean water and sanitation (Goal 6) besides being potentially useful for others (eg. Goal 15 - Life on land).


In general, Evotranspiration studies can be utilized for-

  • Irrigation planning & scheduling - supplying water to agri-zones that face moisture scarcity

  • Watershed and Water Rights management - who should get to use the water and how much?

  • Crop Yield forecast - limited or excessive moisture impacts harvest, resulting in food shortage

  • Drought monitoring - by studying the interplay between precipitation and evotranspiration

  • Climate Change impact - Global Warming affects the Hydrologic cycle (ET being integral to it)

  • Drainage studies - as excess water transfers into the soil and water table, or flows as runoff

  1. PROCESS FLOW FOR ESTIMATING DAILY ACTUAL EVOTRANSPIRATION AT FIELD SCALE USING REMOTE SENSING


For this Field scale, Daily Actual Evotranspiration estimation study over an agricultural zone in Punjab (India), I have utilized the the methodology developed by the European Space Agency-funded Sentinels for Evapotranspiration (Sen-ET) project - you may refer to Chapter 1 and Chapter 2 in their user manual which outlines-

  • the literature pertaining to measuring Evotranspiration using Remote Sensing techniques,

  • how leveraging the synergies between Sentinel-2 & Sentinel-3 satellites allows for Field scale measurement of ET (something that was not possible to do before at consistent time intervals),

  • the Meteorological datasets utilized in this Daily ETa estimation methodology


I had used Version 9.0.0 of ESA's SNAP Software to perform my study. The process flow of the steps involved have been diagrammatically represented below-

clicking on the infographic will open an enlarged view and you can download it as well

Process Flow for estimating Daily Actual Evotranspiration at Field scale using SNAP software. Methodology developed by Sen-ET.
Figure 7: Process Flow for estimating Daily Actual Evotranspiration at Field scale using SNAP software. Methodology developed by Sen-ET.

Some of the vital aspects to be taken into consideration if you decide to replicate this study are-


As the process flow is complicated, and also because the information and tweaks pertaining to performing this study is scattered across a few websites in written form, I have attempted to develop a singular resource which would serve as a ready reckoner - a step-by-step, video tutorial for students and practitioners alike. When Jessey and myself were stuck, it took us hours to figure out what went wrong and to find a working solution - I hope this walkthrough would spare you from a similar ordeal.


While I will elaborate the processing steps and the generated outputs pertaining to my study in the next section, the video tutorial below would be the definitive guide for you to understand the process involved in estimating Daily ETa at Field scale in a visual and engaging manner-

Video 1: Tutorial demonstrating the process of estimating Daily Actual Evotranspiration at Field scale using Remote Sensing

TIMESTAMPS


00:05 - Case Details


00:20 - P1: Background & Setting up

00:24 - P1.1: Understanding the Area of Interest (AoI)

01:12 - P1.2: Downloading the Geographic Extent of the AoI

03:25 - P1.3: Downloading Sentinel-2 Satellite Imagery Dataset

06:35 - P1.4: Downloading Sentinel-3 Satellite Imagery Dataset

11:25 - P1.5: Set-up Intricacies

14:00 - P1.6: SNAP Software Set-up


18:27 - P2: Sentinel-2 Processing Workflow

18:30 - P2.1: Pre-Processing Graph

26:10 - P2.2: Add Elevation Graph

28:04 - P2.3: Add Landcover Graph

33:24 - P2.4: Estimating Leaf Reflectance & Transmittance

35:47 - P2.5: Estimating Fraction of Green Vegetation

38:34 - P2.6: Producing Maps of Vegetation Structural Parameters

42.47 - P2.7: Estimating Aerodynamic Roughness


44.37 - P3: Sentinel-3 Processing Workflow

45.12 - P3.1: Loading Sentinel-3 Dataset

46.02 - P3.2: Pre-Processing Graph

53:15 - P3.3: Warp to Template

55:55 - P3.4: Sharpen LST


59.51 - P4: ERA-5 Pre-Processing Workflow

59.54 - P4.1: Downloading ECMWF ERA-5 Reanalysis Data

01:07:04 - P4.2: Preparing ECMWF ERA-5 Reanalysis Data


01:10:00 - P5: Land-surface Energy Fluxes Modelling Workflow

01:10:04 - P5.1: Estimating Longwave Irradiance

01:12:07 - P5.2: Estimating Net Shortwave Radiation

01:14:32 - P5.3: Estimating Land-Surface Energy Fluxes

01:17:29 - P5.4: Estimating Daily (Actual) Evotranspiration


01:19:39 - Summary Note

  1. ESTIMATING DAILY ACTUAL EVOTRANSPIRATION AT FIELD SCALE OVER AN AGRI-REGION IN PUNJAB, INDIA

The study area lies between Jalandhar and Ludhiana in Punjab, India - the map depicts the Daily Actual Evotranspiration estimation at Field scale on 4th June 2022
Figure 8: The study area lies between Jalandhar and Ludhiana in Punjab, India - the map depicts the Daily Actual Evotranspiration estimation at Field scale on 4th June 2022

I chose this agricultural region (Figure 8) in the state of Punjab, India as my study area because-

  • I wanted to shortlist an agricultural zone within my home country

  • the state of Punjab ranks high in staples production, particularly for Wheat and Rice

  • the average landholding in the state is high at 3.62 hectares, suitable for Field scale analysis

  • the Rice–Wheat (RW) belt in north-west India has faced excessive decline in Groundwater table


The timeline of the study (the Sentinel-3 dataset was acquired was on 4th June 2022) was when the still-ongoing export ban on Wheat was initially implemented due to unseasonal rains i.e. excessive precipitation which damaged the harvest - the government felt the need to protect India's food security and keep the food inflation in check amidst the Ukraine war which was adversely impacting agri-supply chains worldwide.

Estimated Daily ETa at Field scale on 4th June 2022, derived using Remote Sensing at an agri-zone in Punjab
Figure 9: Estimated Daily ETa at Field scale on 4th June 2022, derived using Remote Sensing at an agri-zone in Punjab

As depicted in the Process Flow diagram (Figure 7), there are three types of Remote Sensing data that need to be processed in order to estimate the Daily Actual Evotranspiration at Field scale-

  1. Sentinel-2 Multispectral Imagery,

  2. Sentinel-3 Thermal Imagery, and

  3. ECMWF ERA5 Meteorological datasets


P.S. You may refer to Figure 3 which lists the factors affecting Evotranspiration and compare it with the processing chain (Figure 7), the video tutorial as well as the written content in the next section to enhance your understanding.


The Sentinel-2 Multispectral Imagery dataset utilized in the study was acquired on 27th May 2022 at 05:36 am. Processing this dataset would help characterize the biophysical state of the land surface at 20 m resolution.


The following outputs are derived from the S-2 processing chain-


Sharing some output visuals over my study area extracted from the Sentinel-2 processing chain-

S-2 - Raw Reflectance data visualized in RGB mode
Figure 10: S-2 - Raw Reflectance data visualized in RGB mode
S-2 Processing - Leaf Area Index (Biophysical parameter) - ratio of one-sided leaf area per unit ground area
Figure 11: S-2 Processing - Leaf Area Index (Biophysical parameter) - ratio of one-sided leaf area per unit ground area
S-2 Processing - Land Cover categorization
Figure 12: S-2 Processing - Land Cover categorization
S-2 Processing - Fraction of Vegetation Cover that is Green (beyond 66%) output
Figure 13: S-2 Processing - Fraction of Vegetation Cover that is Green (beyond 66%) output
S-2 Processing - Vegetation Height output in metres
Figure 14: S-2 Processing - Vegetation Height output in metres

The Sentinel-3 Thermal Imagery dataset utilized in the study was acquired on 4th June 2022 at 05:26 am. Processing this dataset would help establish the bottom boundary condition of the Land Surface Energy Model. In simpler words, I seek to estimate the Land Surface Temperature over the study area which is an important input directly relevant to measure the water vapour and surface energy released i.e. Evotranspiration.


Sentinel-3 datasets have a low spatial resolution (~ 1 km), and the processing chain entails enhancing it using the Data Mining Sharpener Machine Learning model. I will enhance it to 20 m - same as that of the processed Sentinel-2 dataset as this is a necessary condition in SNAP in order to perform subsequent analysis involving both the datasets.


The following outputs are derived from the S-3 processing chain-

Sharing some output visuals over my study area extracted from Sentinel-3 processing chain-

S-3 Processing - Cloud Mask (Black pixels i.e Null data values)
Figure 15: S-3 Processing - Cloud Mask (Black pixels i.e Null data values)
S-3 Processing - Land Surface Temperature Default (above) & Sharpened (below) in Kelvin
Figure 16: S-3 Processing - Land Surface Temperature Default (above) and Sharpened (below) in Kelvin

The downloaded ECMWF ERA5 Meteorological data is interpolated in order to match the time of Sentinel-3 acquisition (4th June 2022) as well as the spatial resolution of the processed Sentinel-2 dataset (20 m). Processing this dataset would help establish conditions which drive (eg. air temperature) and modulate (eg. wind speed) the energy transfer between surface and the atmosphere.


The following outputs are derived from the ECMWF ERA5 Meteorological data processing chain-

  • Conversion of Meteorological data (Air Temperature, Vapour Pressure, Air Pressure, Wind Speed, Clear Sky Solar Radiation & Average Daily Solar Irradiance) from 2 m above ground to 100 m above ground

  • Pairing the modified and enhanced meteorological data with some of the outputs derived during the Sentinel-2 and Sentinel-3 processing chain in order to estimate the Longwave Irradiance and Net Shortwave Radiation of Canopy and Soil respectively

  • Pairing several output datasets derived from all the processing chains to estimate Land Surface Energy Fluxes using the Two Source Energy Balance Model. There are four instantaneous fluxes which are estimated at the time of Sentinel-3 dataset acquisition (4th June 2022) - Sensible Heat Flux, Latent Heat Flux, Ground Heat Flux and Net Surface Irradiation (recollect that Evotranspiration is measured in energy released terms besides in water vapour terms - Latent Heat Flux represents the energy released during Evotranspiration)

  • Finally, the instantaneous Latent Heat Flux is converted to Water Vapour terms (millimeters/unit of time) to obtain the estimate of the Daily Actual Evotranspiration (ETa) at Field scale over the study area


Sharing some output visuals over my study area extracted from the ECMWF ERA5 Meteorological data processing chain-

ERA5 Processing - Prepared meteorological parameters at the time of S-3 overpass (4th June 2022 at 05.26 am)
Figure 17: ERA5 Processing - prepared Meteorological parameters at the time of S-3 overpass (4th June 2022 at 05.26 am)
ERA5 Processing - contrasting Net Shortwave Radiation outputs at Canopy-level (above) and at Soil-level (below)
Figure 18: ERA5 Processing - contrasting Net Shortwave Radiation outputs at Canopy-level (above) and at Soil-level (below)
ERA5 Processing - Latent Heat Flux (ETa in energy released terms) represented as Watts per square meter
Figure 19: ERA5 Processing - Latent Heat Flux (ETa in energy released terms) represented as Watts per square meter
Daily Actual Evotranspiration (ETa) at Field scale of 20 m over an agri-zone in Punjab of India, as on 4th June 2022, 05:26 am measured in mm/day. Minimum of 0.2 mm/day, maximum of 10.0 mm/day and a mean of 3.8 mm/day was observed
Figure 20: Daily Actual Evotranspiration (ETa) at Field scale of 20 m over an agri-zone in Punjab of India, as on 4th June 2022, 05:26 am measured in mm/day. Minimum of 0.2 mm/day, maximum of 10.0 mm/day and a mean of 3.8 mm/day was observed

As indicated in Figure 20 above, the derived estimate of Daily Actual Evotranspiration at Field scale (20 m) over the selected agri-zone in Punjab, India (north of the Sutlej river) ranges from a minimum of 0.2 mm/day to a maximum of 10.0 mm/day with a mean of 3.8 mm/day (bulk of the pixels have values between 1.3 and 6.1 mm/day).

CONCLUDING OBSERVATIONS


So how is one supposed to interpret this estimated Daily Actual Evotranspiration at Field-scale output? Is it high or low, good or bad, improving or deteriorating?


Unfortunately, I am not a hydrology expert and am unable to assess the output which has been derived using complex manipulations and with several linkages between the variables. That being said, I can definitely remark that in order to pass a judgement on the trend of Evotranspiration, a single output such as this one would not be conclusive evidence, rather, a time-series of observations and the evolution of underlying causes (data can be obtained from local weather stations) would need to be studied. You can also conduct independent research to see how this output compares with other research studies on Evotranspiration performed on Indian territory or overseas. I'll be happy to know what you find.


There are other factors aspects to be taken into consideration as well - for example, the Meteorological data which I prepared (Air Temperature and Solar Radiance constituted a portion of it) was at the time of Sentinel-3 overpass (05:26 am i.e. Dawn). This is a cooler part of the day despite the month (June) being peak summer in India. I am certain that the algorithm would interpolate the Daily ETa in a different way had I selected another Sentinel-3 dataset that was acquired during the same season, albeit when the temperatures are higher (afternoon). Unfortunately, I cannot test this assumption as Sentinel-3 data over the study area is not available in this time window - the satellite's orbit path stipulates that the overpass is made only at specified times of the day at fixed intervals (revisit time for S-3 is <2 days near the equator).


I would like to highlight an interesting aspect that I observed when I used the same datasets and timeline to estimate the Daily ETa at Field scale, albeit for a different study area (an agri-zone located north-west to the previous study area). Refer the output below-

Estimated Daily Actual Evotranspiration (ETa) at Field-scale of 20 m over another agri-zone in Punjab of India as on 4th June 2022, 05:26 am measured in mm/day (the new study area lies north-west to the previous one while the time of data acquisition remains the same).
Figure 21: Estimated Daily Actual Evotranspiration (ETa) at Field-scale of 20 m over another agri-zone in Punjab of India as on 4th June 2022, 05:26 am measured in mm/day (the new study area lies north-west to the previous one while the time of data acquisition remains the same).

Compare the Daily ETa output in Figure 21 above with that in Figure 20. What do you infer?


As you would observe, the south-east half of the new study area depicted in Figure 21 is red in shade signifying a higher rate of ETa - between 7-9 mm/day. In comparison, as evident in Figure 20, much of the previous study area is predominantly dark yellow - a lower rate of ETa - between 3-5 mm/day.


Doesn't this strike you as surprising given that both the study areas are so close to each other and the measurement was done during the exact same time? What could be the reason(s) behind it?


In my opinion, this could very well be attributed to both the agri-zones cultivating a different type of crop. Recollect that Punjab cultivates Rice as well as Wheat extensively and this zone lies within the Rice–Wheat (RW) belt. As indicated in the Factors affecting Evotranspiration infographic (Figure 3) - the nature of crop, its root system, agricultural practises used, and the growth stage of the crop - all affect the rate of Evotranspiration. Hence, I surmise that this large difference in ETa values could be particularly due to the different moisture retention properties of the crop being cultivated in both the study areas - the crop in the new study area retains much less moisture than the crop in the previous study area.



I hope you found this post and the accompanying video tutorial to be useful. Your feedback and suggestions are welcome.

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